Human Tumor Atlas Network


HTAN is a National Cancer Institute (NCI)-funded Cancer MoonshotSM initiative to construct 3-dimensional atlases of the dynamic cellular, morphological, and molecular features of human cancers as they evolve from precancerous lesions to advanced disease.

14
Atlases
20
Organs
2231
Cases
9748
Biospecimen

The latest HTAN data release includes tumors originating from 20 tumor sites:

# of Cases1101001000StomachBonePleuraLymph NodesSoft TissueLiverUterusKidneyCervixBrainHead and NeckOvaryOther and Ill-defined SitesAdrenal GlandBone MarrowPancreasSkinColorectalLungBreast

The tumors were profiled with 31 different types of assays:

# of Cases1101001000scDNA-seqSABER10X Xenium ISSShotgun MS (lipidomics)Mass SpectrometryLC-MS3LC-MS/MSExSEQIMCHI-C-seqRPPAElectron MicroscopyAccessory ManifestBulk Methylation-seqSlide-seq V2Slide-seqMERFISHNanoString GeoMX DSPMxIFmIHCCODEXRareCyte Orion10X VisiumMIBICyCIFImagingscATAC-seqscRNA-seqBulk RNA-seqH&EBulk DNA

Many more profiled tumors will be available in the future. Stay tuned!